IL_9ZTL_113

3D structure

PDB id

9ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Single Particle Cryo EM Analysis of a Ribosome Nascent Globin Complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

CGAGG*CGUAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9ZTL_113 not in the Motif Atlas

Homologous match to IL_7A0S_049

Geometric discrepancy: 0.2539

The information below is about IL_7A0S_049

Detailed Annotation

tSH-tWH-tHS

Broad Annotation

No text annotation

Motif group

IL_05821.2

Basepair signature

cWW-tSH-tHW-tHS-cWW

Number of instances in this motif group

19

Unit IDs

9ZTL|1|a|C|1357
9ZTL|1|a|G|1358
9ZTL|1|a|A|1359
9ZTL|1|a|G|1360
9ZTL|1|a|G|1361
*
9ZTL|1|a|C|1370
9ZTL|1|a|G|1371
9ZTL|1|a|U|1372
9ZTL|1|a|A|1373
9ZTL|1|a|G|1374

Current chains

Chain a

23s rRNA

Nearby chains

Chain 1

50S ribosomal protein L34

Chain c

50S ribosomal protein L2