J3_11BQ_023
3D structure
- PDB id
- 11BQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli 70S ribosome containing an evolved 16S rRNA (EC-S3.5)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CAG*CGAAC*GAUG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_11BQ_023 not in the Motif Atlas
- Homologous match to J3_7A0S_005
- Geometric discrepancy: 0.101
- The information below is about J3_7A0S_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_69816.2
- Basepair signature
- cWW-tHS-F-cWW-tHS-cWW-F
- Number of instances in this motif group
- 10
Unit IDs
11BQ|1|a|C|698
11BQ|1|a|A|699
11BQ|1|a|G|700
*
11BQ|1|a|C|732
11BQ|1|a|G|733
11BQ|1|a|A|734
11BQ|1|a|A|735
11BQ|1|a|C|736
*
11BQ|1|a|G|760
11BQ|1|a|A|761
11BQ|1|a|U|762
11BQ|1|a|G|763
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain c
- 50S ribosomal protein L2
Coloring options: