J3_11BQ_027
3D structure
- PDB id
- 11BQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli 70S ribosome containing an evolved 16S rRNA (EC-S3.5)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GGGACG*CC*GAAAAGC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_11BQ_027 not in the Motif Atlas
- Homologous match to J3_7A0S_019
- Geometric discrepancy: 0.1197
- The information below is about J3_7A0S_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_34864.3
- Basepair signature
- cWW-tSH-tSH-tHH-F-F-cWW-F-cWW
- Number of instances in this motif group
- 4
Unit IDs
11BQ|1|a|G|1424
11BQ|1|a|G|1425
11BQ|1|a|G|1426
11BQ|1|a|A|1427
11BQ|1|a|C|1428
11BQ|1|a|G|1429
*
11BQ|1|a|C|1564
11BQ|1|a|C|1565
*
11BQ|1|a|G|1568
11BQ|1|a|A|1569
11BQ|1|a|A|1570
11BQ|1|a|A|1571
11BQ|1|a|A|1572
11BQ|1|a|G|1573
11BQ|1|a|C|1574
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain c
- 50S ribosomal protein L2
Coloring options: