J3_11GG_003
3D structure
- PDB id
- 11GG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-ST)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.02 Å
Loop
- Sequence
- UGG*CUAG*CA
- Length
- 9 nucleotides
- Bulged bases
- 11GG|1|C|A|647
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_11GG_003 not in the Motif Atlas
- Geometric match to J3_8B0X_002
- Geometric discrepancy: 0.0937
- The information below is about J3_8B0X_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_01633.2
- Basepair signature
- cWW-F-cWW-cWW-F
- Number of instances in this motif group
- 5
Unit IDs
11GG|1|C|U|580
11GG|1|C|G|581
11GG|1|C|G|582
*
11GG|1|C|C|645
11GG|1|C|U|646
11GG|1|C|A|647
11GG|1|C|G|648
*
11GG|1|C|C|748
11GG|1|C|A|749
Current chains
- Chain C
- 16S ribosomal RNA
Nearby chains
- Chain o
- Small ribosomal subunit protein uS8
- Chain t
- 30S ribosomal protein S12
- Chain w
- Small ribosomal subunit protein uS15
- Chain y
- Small ribosomal subunit protein uS17
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