J3_11GG_012

3D structure

PDB id

11GG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-ST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.02 Å

Loop

Sequence

GAACUUUC*GAUUGGUGC*GAAC

Length

21 nucleotides

Bulged bases

11GG|1|C|U|1003

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11GG|1|C|G|997
11GG|1|C|A|998
11GG|1|C|A|999
11GG|1|C|C|1000
11GG|1|C|U|1001
11GG|1|C|U|1002
11GG|1|C|U|1003
11GG|1|C|C|1004
*
11GG|1|C|G|1013
11GG|1|C|A|1014
11GG|1|C|U|1015
11GG|1|C|U|1016
11GG|1|C|G|1017
11GG|1|C|G|1018
11GG|1|C|U|1019
11GG|1|C|G|1020
11GG|1|C|C|1021
*
11GG|1|C|G|1028
11GG|1|C|A|1029
11GG|1|C|A|1030
11GG|1|C|C|1031

Current chains

Chain C

16S ribosomal RNA

Nearby chains

Chain E

Small ribosomal subunit protein uS3

Chain v

Small ribosomal subunit protein uS14