J3_11GG_015

3D structure

PDB id

11GG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-ST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.02 Å

Loop

Sequence

UGUCC*GAGACUGCC*GAGGAAGGUG

Length

24 nucleotides

Bulged bases

11GG|1|C|U|1177

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11GG|1|C|U|1110
11GG|1|C|G|1111
11GG|1|C|U|1112
11GG|1|C|C|1113
11GG|1|C|C|1114
*
11GG|1|C|G|1148
11GG|1|C|A|1149
11GG|1|C|G|1150
11GG|1|C|A|1151
11GG|1|C|C|1152
11GG|1|C|U|1153
11GG|1|C|G|1154
11GG|1|C|C|1155
11GG|1|C|C|1156
*
11GG|1|C|G|1169
11GG|1|C|A|1170
11GG|1|C|G|1171
11GG|1|C|G|1172
11GG|1|C|A|1173
11GG|1|C|A|1174
11GG|1|C|G|1175
11GG|1|C|G|1176
11GG|1|C|U|1177
11GG|1|C|G|1178

Current chains

Chain C

16S ribosomal RNA

Nearby chains

Chain D

Small ribosomal subunit protein uS2

Chain n

Small ribosomal subunit protein uS7

Chain p

Small ribosomal subunit protein uS9

Chain q

Small ribosomal subunit protein uS10

Chain v

Small ribosomal subunit protein uS14