J3_11GG_033

3D structure

PDB id

11GG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-ST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.02 Å

Loop

Sequence

GAAC*GUUGAU*AAUGAAC

Length

17 nucleotides

Bulged bases

11GG|1|I|U|2833, 11GG|1|I|A|2835

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11GG|1|I|G|2812
11GG|1|I|A|2813
11GG|1|I|A|2814
11GG|1|I|C|2815
*
11GG|1|I|G|2831
11GG|1|I|U|2832
11GG|1|I|U|2833
11GG|1|I|G|2834
11GG|1|I|A|2835
11GG|1|I|U|2836
*
11GG|1|I|A|2882
11GG|1|I|A|2883
11GG|1|I|U|2884
11GG|1|I|G|2885
11GG|1|I|A|2886
11GG|1|I|A|2887
11GG|1|I|C|2888

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain 4

Large ribosomal subunit protein uL22

Chain L

Large ribosomal subunit protein uL3

Chain V

Large ribosomal subunit protein bL17

Chain i

50S ribosomal protein L32