J3_11IQ_029
3D structure
- PDB id
- 11IQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,eIF5A and SERBP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- AGAUGG*CGUUCCGAAGGG*CAGCCGAU
- Length
- 26 nucleotides
- Bulged bases
- 11IQ|1|28|C|2470, 11IQ|1|28|A|2472, 11IQ|1|28|G|2475
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
11IQ|1|28|A|2451
11IQ|1|28|G|2452
11IQ|1|28|A|2453
11IQ|1|28|U|2454
11IQ|1|28|G|2455
11IQ|1|28|G|2456
*
11IQ|1|28|C|2465
11IQ|1|28|G|2466
11IQ|1|28|U|2467
11IQ|1|28|U|2468
11IQ|1|28|C|2469
11IQ|1|28|C|2470
11IQ|1|28|G|2471
11IQ|1|28|A|2472
11IQ|1|28|A|2473
11IQ|1|28|G|2474
11IQ|1|28|G|2475
11IQ|1|28|G|2476
*
11IQ|1|28|C|2501
11IQ|1|28|A|2502
11IQ|1|28|G|2503
11IQ|1|28|C|2504
11IQ|1|28|C|2505
11IQ|1|28|G|2506
11IQ|1|28|A|2507
11IQ|1|28|U|2508
Current chains
- Chain 28
- 28S rRNA
Nearby chains
- Chain 15
- 60S ribosomal protein L15
- Chain 37
- 60S ribosomal protein L37
- Chain 58
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain L8
- 60S ribosomal protein L8
- Chain aa
- Large ribosomal subunit protein eL8
- Chain cc
- Large ribosomal subunit protein uL23
Coloring options: