J3_11JJ_021
3D structure
- PDB id
- 11JJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,IFRD2 and LARP1,40S-head-swiveled
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GCAG*CGUAG*UCCGAC
- Length
- 15 nucleotides
- Bulged bases
- 11JJ|1|28|A|1613
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
11JJ|1|28|G|1545
11JJ|1|28|C|1546
11JJ|1|28|A|1547
11JJ|1|28|G|1548
*
11JJ|1|28|C|1580
11JJ|1|28|G|1581
11JJ|1|28|U|1582
11JJ|1|28|A|1583
11JJ|1|28|G|1584
*
11JJ|1|28|U|1609
11JJ|1|28|C|1610
11JJ|1|28|C|1611
11JJ|1|28|G|1612
11JJ|1|28|A|1613
11JJ|1|28|C|1614
Current chains
- Chain 28
- 28S rRNA
Nearby chains
- Chain 19
- 60S ribosomal protein L19
- Chain 34
- 60S ribosomal protein L34
- Chain L8
- 60S ribosomal protein L8
- Chain ff
- 60S ribosomal protein L37a
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