J3_1F7Y_002
3D structure
- PDB id
- 1F7Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- THE CRYSTAL STRUCTURE OF TWO UUCG LOOPS HIGHLIGHTS THE ROLE PLAYED BY 2'-HYDROXYL GROUPS IN ITS UNUSUAL STABILITY
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- CGG*CUAGA*UGACG
- Length
- 13 nucleotides
- Bulged bases
- 1F7Y|1|B|A|17
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_1F7Y_002 not in the Motif Atlas
- Geometric match to J3_1KUQ_002
- Geometric discrepancy: 0.0658
- The information below is about J3_1KUQ_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17385.4
- Basepair signature
- cWW-F-cWW-cWW-tWH-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
1F7Y|1|B|C|4
1F7Y|1|B|G|5
1F7Y|1|B|G|6
*
1F7Y|1|B|C|15
1F7Y|1|B|U|16
1F7Y|1|B|A|17
1F7Y|1|B|G|18
1F7Y|1|B|A|19
*
1F7Y|1|B|U|50
1F7Y|1|B|G|51
1F7Y|1|B|A|52
1F7Y|1|B|C|53
1F7Y|1|B|G|54
Current chains
- Chain B
- 16S RIBOSOMAL RNA FRAGMENT
Nearby chains
- Chain A
- 30S RIBOSOMAL PROTEIN S15
Coloring options: