1F7Y Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_1F7Y_001 | 1/B/8:13 | UNCG | geometric HL_1KUQ_001 HL_61337.1 | |
| HL_1F7Y_002 | 1/B/32:37 | UNCG | geometric HL_1KUQ_001 HL_61337.1 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_1F7Y_001 | 1/B/18:19, 1/B/50:53 | Major groove platform; stack outside cWW | geometric IL_1KUQ_001 IL_74641.1 | |
| IL_1F7Y_002 | 1/B/21:22, 1/B/46:48 | Single bulged C | geometric IL_1KUQ_002 IL_05642.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_1F7Y_003 | Tandem non-canonical cWW pairs |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_1F7Y_001 | 1/B/4:6, 1/B/15:18, 1/B/53:54 | No text annotation | geometric J3_1KUQ_001 J3_01633.1 | |
| J3_1F7Y_002 | 1/B/4:6, 1/B/15:19, 1/B/50:54 | No text annotation | geometric J3_1KUQ_002 J3_17385.5 |
Problematic loops
No problematic loops
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