J3_1HC8_001
3D structure
- PDB id
- 1HC8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- GGA*UUUAAAG*CAC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_28621.1
- Basepair signature
- cWW-tWW-tHS-tSH-cWW-tSS-F-cSS-cWW
- Number of instances in this motif group
- 6
Unit IDs
1HC8|1|C|G|105
1HC8|1|C|G|106
1HC8|1|C|A|107
*
1HC8|1|C|U|131
1HC8|1|C|U|132
1HC8|1|C|U|133
1HC8|1|C|A|134
1HC8|1|C|A|135
1HC8|1|C|A|136
1HC8|1|C|G|137
*
1HC8|1|C|C|152
1HC8|1|C|A|153
1HC8|1|C|C|154
Current chains
- Chain C
- 58 NUCLEOTIDE RIBOSOMAL 23S RNA DOMAIN
Nearby chains
- Chain A
- RIBOSOMAL PROTEIN L11
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