J3_1HMH_004
3D structure
- PDB id
- 1HMH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- THREE-DIMENSIONAL STRUCTURE OF A HAMMERHEAD RIBOZYME
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- CCUGAUGAG*CGAAAC*GTCG
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_45099.1
- Basepair signature
- cWW-cWW-F-F-F-cWW-F-cSW-F-tSH-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
1HMH|1|A|C|21
1HMH|1|A|C|30
1HMH|1|A|U|40
1HMH|1|A|G|50
1HMH|1|A|A|60
1HMH|1|A|U|70
1HMH|1|A|G|80
1HMH|1|A|A|90
1HMH|1|A|G|101
*
1HMH|1|A|C|111
1HMH|1|A|G|120
1HMH|1|A|A|130
1HMH|1|A|A|140
1HMH|1|A|A|151
1HMH|1|A|C|152
*
1HMH|1|B|DG|162
1HMH|1|B|DT|161
1HMH|1|B|DC|170
1HMH|1|B|DG|11
Current chains
- Chain A
- HAMMERHEAD RIBOZYME-RNA STRAND
- Chain B
- HAMMERHEAD RIBOZYME-DNA STRAND
Nearby chains
- Chain D
- HAMMERHEAD RIBOZYME-DNA STRAND
- Chain E
- HAMMERHEAD RIBOZYME-RNA STRAND
- Chain F
- HAMMERHEAD RIBOZYME-DNA STRAND
Coloring options: