J3_1I95_007
3D structure
- PDB id
- 1I95 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH EDEINE
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4.5 Å
Loop
- Sequence
- CGUCAG*CGCAACC*GACGACG
- Length
- 20 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_1I95_007 not in the Motif Atlas
- Homologous match to J3_4LFB_007
- Geometric discrepancy: 0.1073
- The information below is about J3_4LFB_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_08394.3
- Basepair signature
- cWW-tSS-F-F-tWH-F-F-cWW-F-cWW-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
1I95|1|A|C|1045
1I95|1|A|G|1046
1I95|1|A|U|1047
1I95|1|A|C|1048
1I95|1|A|A|1049
1I95|1|A|G|1050
*
1I95|1|A|C|1089
1I95|1|A|G|1090
1I95|1|A|C|1091
1I95|1|A|A|1092
1I95|1|A|A|1093
1I95|1|A|C|1094
1I95|1|A|C|1095
*
1I95|1|A|G|1168
1I95|1|A|A|1169
1I95|1|A|C|1170
1I95|1|A|G|1171
1I95|1|A|A|1172
1I95|1|A|C|1173
1I95|1|A|G|1174
Current chains
- Chain A
- 16S RRNA
Nearby chains
- Chain C
- 30S RIBOSOMAL PROTEIN S3
- Chain E
- 30S RIBOSOMAL PROTEIN S5
- Chain I
- 30S RIBOSOMAL PROTEIN S9
- Chain J
- 30S RIBOSOMAL PROTEIN S10
- Chain N
- 30S RIBOSOMAL PROTEIN S14
Coloring options: