J3_1J2B_001

3D structure

PDB id

1J2B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure Of Archaeosine tRNA-Guanine Transglycosylase Complexed With lambda-form tRNA(Val)

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GUGGUCUAGUUGGUCAUG*CC*GC

Length

22 nucleotides

Bulged bases

1J2B|1|C|U|908, 1J2B|1|C|A|914, 1J2B|1|C|G|915, 1J2B|1|C|U|916, 1J2B|1|C|U|917

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_63687.1

Basepair signature

cWW-F-cWW-F-F-cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

1

Unit IDs

1J2B|1|C|G|907
1J2B|1|C|U|908
1J2B|1|C|G|909
1J2B|1|C|G|910
1J2B|1|C|U|911
1J2B|1|C|C|912
1J2B|1|C|U|913
1J2B|1|C|A|914
1J2B|1|C|G|915
1J2B|1|C|U|916
1J2B|1|C|U|917
1J2B|1|C|G|918
1J2B|1|C|G|919
1J2B|1|C|U|920
1J2B|1|C|C|921
1J2B|1|C|A|922
1J2B|1|C|U|923
1J2B|1|C|G|924
*
1J2B|1|C|C|949
1J2B|1|C|C|950
*
1J2B|1|C|G|966
1J2B|1|C|C|967

Current chains

Chain C

tRNA(Val)

Nearby chains

Chain A

Archaeosine tRNA-guanine transglycosylase

Chain B

Archaeosine tRNA-guanine transglycosylase