J3_1NKW_001

3D structure

PDB id

1NKW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UGAGCUA*UAGGA*UAACCGAA

Length

20 nucleotides

Bulged bases

1NKW|1|0|A|802, 1NKW|1|0|C|803, 1NKW|1|0|G|805

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1NKW|1|0|U|696
1NKW|1|0|G|697
1NKW|1|0|A|698
1NKW|1|0|G|699
1NKW|1|0|C|700
1NKW|1|0|U|701
1NKW|1|0|A|702
*
1NKW|1|0|U|786
1NKW|1|0|A|787
1NKW|1|0|G|788
1NKW|1|0|G|789
1NKW|1|0|A|790
*
1NKW|1|0|U|800
1NKW|1|0|A|801
1NKW|1|0|A|802
1NKW|1|0|C|803
1NKW|1|0|C|804
1NKW|1|0|G|805
1NKW|1|0|A|806
1NKW|1|0|A|807

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain A

50S ribosomal protein L2

Chain C

50S ribosomal protein L4

Chain Q

50S ribosomal protein L22