J3_1NKW_015
3D structure
- PDB id
- 1NKW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAG*CGGAG*CGAGUCCGAAUAGGGCGGCAUUAG
- Length
- 33 nucleotides
- Bulged bases
- 1NKW|1|0|A|648, 1NKW|1|0|A|654, 1NKW|1|0|A|655, 1NKW|1|0|U|656, 1NKW|1|0|A|665, 1NKW|1|0|U|666, 1NKW|1|0|U|667
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
1NKW|1|0|C|611
1NKW|1|0|G|612
1NKW|1|0|A|613
1NKW|1|0|G|614
*
1NKW|1|0|C|635
1NKW|1|0|G|636
1NKW|1|0|G|637
1NKW|1|0|A|638
1NKW|1|0|G|639
*
1NKW|1|0|C|646
1NKW|1|0|G|647
1NKW|1|0|A|648
1NKW|1|0|G|649
1NKW|1|0|U|650
1NKW|1|0|C|651
1NKW|1|0|C|652
1NKW|1|0|G|653
1NKW|1|0|A|654
1NKW|1|0|A|655
1NKW|1|0|U|656
1NKW|1|0|A|657
1NKW|1|0|G|658
1NKW|1|0|G|659
1NKW|1|0|G|660
1NKW|1|0|C|661
1NKW|1|0|G|662
1NKW|1|0|G|663
1NKW|1|0|C|664
1NKW|1|0|A|665
1NKW|1|0|U|666
1NKW|1|0|U|667
1NKW|1|0|A|668
1NKW|1|0|G|669
Current chains
- Chain 0
- 23S ribosomal RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L33
- Chain 3
- 50S ribosomal protein L35
- Chain C
- 50S ribosomal protein L4
- Chain J
- 50S ribosomal protein L15
Coloring options: