J3_1NKW_016

3D structure

PDB id

1NKW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGA*UUCAAAGAGUGC*GCUCAC

Length

21 nucleotides

Bulged bases

1NKW|1|0|G|1067, 1NKW|1|0|A|1099, 1NKW|1|0|G|1100

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1NKW|1|0|G|1066
1NKW|1|0|G|1067
1NKW|1|0|A|1068
*
1NKW|1|0|U|1092
1NKW|1|0|U|1093
1NKW|1|0|C|1094
1NKW|1|0|A|1095
1NKW|1|0|A|1096
1NKW|1|0|A|1097
1NKW|1|0|G|1098
1NKW|1|0|A|1099
1NKW|1|0|G|1100
1NKW|1|0|U|1101
1NKW|1|0|G|1102
1NKW|1|0|C|1103
*
1NKW|1|0|G|1110
1NKW|1|0|C|1111
1NKW|1|0|U|1112
1NKW|1|0|C|1113
1NKW|1|0|A|1114
1NKW|1|0|C|1115

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain 4

50S ribosomal protein L36

Chain G

50S ribosomal protein L11