J3_1NKW_017

3D structure

PDB id

1NKW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGUUC*GGAAAGUC*GUAC

Length

17 nucleotides

Bulged bases

1NKW|1|0|G|1324, 1NKW|1|0|U|1325, 1NKW|1|0|A|1354

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1NKW|1|0|G|1323
1NKW|1|0|G|1324
1NKW|1|0|U|1325
1NKW|1|0|U|1326
1NKW|1|0|C|1327
*
1NKW|1|0|G|1351
1NKW|1|0|G|1352
1NKW|1|0|A|1353
1NKW|1|0|A|1354
1NKW|1|0|A|1355
1NKW|1|0|G|1356
1NKW|1|0|U|1357
1NKW|1|0|C|1358
*
1NKW|1|0|G|1617
1NKW|1|0|U|1618
1NKW|1|0|A|1619
1NKW|1|0|C|1620

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain R

50S ribosomal protein L23