J3_1NWY_001

3D structure

PDB id

1NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

UGAGCUA*UAGGAG*CUAACCGAA

Length

22 nucleotides

Bulged bases

1NWY|1|0|G|699, 1NWY|1|0|G|789, 1NWY|1|0|A|802, 1NWY|1|0|C|803, 1NWY|1|0|G|805

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1NWY|1|0|U|696
1NWY|1|0|G|697
1NWY|1|0|A|698
1NWY|1|0|G|699
1NWY|1|0|C|700
1NWY|1|0|U|701
1NWY|1|0|A|702
*
1NWY|1|0|U|786
1NWY|1|0|A|787
1NWY|1|0|G|788
1NWY|1|0|G|789
1NWY|1|0|A|790
1NWY|1|0|G|791
*
1NWY|1|0|C|799
1NWY|1|0|U|800
1NWY|1|0|A|801
1NWY|1|0|A|802
1NWY|1|0|C|803
1NWY|1|0|C|804
1NWY|1|0|G|805
1NWY|1|0|A|806
1NWY|1|0|A|807

Current chains

Chain 0

23S RIBOSOMAL RRNA

Nearby chains

Chain 2

ribosomal protein L34

Chain A

ribosomal protein L2

Chain Q

ribosomal protein L22