J3_1NWY_007

3D structure

PDB id

1NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CUCAA*UGUAGAGC*GUAGAAG

Length

20 nucleotides

Bulged bases

1NWY|1|0|U|2275, 1NWY|1|0|U|2298, 1NWY|1|0|G|2313

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1NWY|1|0|C|2274
1NWY|1|0|U|2275
1NWY|1|0|C|2276
1NWY|1|0|A|2277
1NWY|1|0|A|2278
*
1NWY|1|0|U|2296
1NWY|1|0|G|2297
1NWY|1|0|U|2298
1NWY|1|0|A|2299
1NWY|1|0|G|2300
1NWY|1|0|A|2301
1NWY|1|0|G|2302
1NWY|1|0|C|2303
*
1NWY|1|0|G|2310
1NWY|1|0|U|2311
1NWY|1|0|A|2312
1NWY|1|0|G|2313
1NWY|1|0|A|2314
1NWY|1|0|A|2315
1NWY|1|0|G|2316

Current chains

Chain 0

23S RIBOSOMAL RRNA

Nearby chains

Chain 9

5S ribosomal RNA; 5S rRNA

Chain D

ribosomal protein L5

Chain M

ribosomal protein L18

Chain U

ribosomal protein L27