J3_1RY1_002
3D structure
- PDB id
- 1RY1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the signal recognition particle interacting with the elongation-arrested ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12 Å
Loop
- Sequence
- CG*UGUAGU*AG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_1RY1_002 not in the Motif Atlas
- Geometric match to J3_1E8O_001
- Geometric discrepancy: 0.0003
- The information below is about J3_1E8O_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_11375.2
- Basepair signature
- cWW-cWW-F-cWW-F-cWW-F
- Number of instances in this motif group
- 3
Unit IDs
1RY1|1|E|C|103
1RY1|1|E|G|104
*
1RY1|1|E|U|123
1RY1|1|E|G|124
1RY1|1|E|U|125
1RY1|1|E|A|126
1RY1|1|E|G|127
1RY1|1|E|U|128
*
1RY1|1|E|A|143
1RY1|1|E|G|144
Current chains
- Chain E
- SRP Alu domain
Nearby chains
- Chain C
- SRP9
- Chain D
- SRP14
- Chain M
- SRP RNA
- Chain N
- SRP RNA
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