J3_1VWW_009
3D structure
- PDB id
- 1VWW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian 60S ribosomal subunit. This entry contains the large subunit ribosomal RNA.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GAGAUGGGC*GCCGUUCCGAAGGG*CGGCCGAUC
- Length
- 32 nucleotides
- Bulged bases
- 1VWW|1|5|C|2470, 1VWW|1|5|A|2472, 1VWW|1|5|G|2475
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
1VWW|1|5|G|2450
1VWW|1|5|A|2451
1VWW|1|5|G|2452
1VWW|1|5|A|2453
1VWW|1|5|U|2454
1VWW|1|5|G|2455
1VWW|1|5|G|2456
1VWW|1|5|G|2457
1VWW|1|5|C|2458
*
1VWW|1|5|G|2463
1VWW|1|5|C|2464
1VWW|1|5|C|2465
1VWW|1|5|G|2466
1VWW|1|5|U|2467
1VWW|1|5|U|2468
1VWW|1|5|C|2469
1VWW|1|5|C|2470
1VWW|1|5|G|2471
1VWW|1|5|A|2472
1VWW|1|5|A|2473
1VWW|1|5|G|2474
1VWW|1|5|G|2475
1VWW|1|5|G|2476
*
1VWW|1|5|C|2501
1VWW|1|5|G|2502
1VWW|1|5|G|2503
1VWW|1|5|C|2504
1VWW|1|5|C|2505
1VWW|1|5|G|2506
1VWW|1|5|A|2507
1VWW|1|5|U|2508
1VWW|1|5|C|2509
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA
Coloring options: