J3_1VWW_014

3D structure

PDB id

1VWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian 60S ribosomal subunit. This entry contains the large subunit ribosomal RNA.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UAUCAUUG*CCAAGCGUU*ACUAAUA

Length

24 nucleotides

Bulged bases

1VWW|1|5|A|4464

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1VWW|1|5|U|4463
1VWW|1|5|A|4464
1VWW|1|5|U|4465
1VWW|1|5|C|4466
1VWW|1|5|A|4467
1VWW|1|5|U|4468
1VWW|1|5|U|4469
1VWW|1|5|G|4470
*
1VWW|1|5|C|4485
1VWW|1|5|C|4486
1VWW|1|5|A|4487
1VWW|1|5|A|4488
1VWW|1|5|G|4489
1VWW|1|5|C|4490
1VWW|1|5|G|4491
1VWW|1|5|U|4492
1VWW|1|5|U|4493
*
1VWW|1|5|A|4507
1VWW|1|5|C|4508
1VWW|1|5|U|4509
1VWW|1|5|A|4510
1VWW|1|5|A|4511
1VWW|1|5|U|4512
1VWW|1|5|A|4513

Current chains

Chain 5

28S ribosomal RNA

Nearby chains