J3_1VWW_016
3D structure
- PDB id
- 1VWW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian 60S ribosomal subunit. This entry contains the large subunit ribosomal RNA.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CCAU*GCUUCUGGGU*ACACAAGGG
- Length
- 23 nucleotides
- Bulged bases
- 1VWW|1|5|C|4990, 1VWW|1|5|A|5061
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
1VWW|1|5|C|4969
1VWW|1|5|C|4970
1VWW|1|5|A|4971
1VWW|1|5|U|4972
*
1VWW|1|5|G|4986
1VWW|1|5|C|4987
1VWW|1|5|U|4988
1VWW|1|5|U|4989
1VWW|1|5|C|4990
1VWW|1|5|U|4991
1VWW|1|5|G|4992
1VWW|1|5|G|4993
1VWW|1|5|G|4994
1VWW|1|5|U|4995
*
1VWW|1|5|A|5056
1VWW|1|5|C|5057
1VWW|1|5|A|5058
1VWW|1|5|C|5059
1VWW|1|5|A|5060
1VWW|1|5|A|5061
1VWW|1|5|G|5062
1VWW|1|5|G|5063
1VWW|1|5|G|5064
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: