J3_1VX2_011
3D structure
- PDB id
- 1VX2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the translating mammalian ribosome-Sec61 complex. This entry contains the small ribosomal subunit.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CUGGC*GGACAAG*CCCGAGAUUG
- Length
- 22 nucleotides
- Bulged bases
- 1VX2|1|2|U|1477
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
1VX2|1|2|C|1391
1VX2|1|2|U|1392
1VX2|1|2|G|1393
1VX2|1|2|G|1394
1VX2|1|2|C|1395
*
1VX2|1|2|G|1450
1VX2|1|2|G|1451
1VX2|1|2|A|1452
1VX2|1|2|C|1453
1VX2|1|2|A|1454
1VX2|1|2|A|1455
1VX2|1|2|G|1456
*
1VX2|1|2|C|1470
1VX2|1|2|C|1471
1VX2|1|2|C|1472
1VX2|1|2|G|1473
1VX2|1|2|A|1474
1VX2|1|2|G|1475
1VX2|1|2|A|1476
1VX2|1|2|U|1477
1VX2|1|2|U|1478
1VX2|1|2|G|1479
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain D
- Ribosomal protein uS3
- Chain F
- Ribosomal protein uS7
- Chain Q
- Ribosomal protein uS9
- Chain R
- Ribosomal protein eS17
- Chain U
- Ribosomal protein uS10
- Chain d
- Ribosomal protein uS14
- Chain g
- Ribosomal protein RACK1
Coloring options: