J3_1Z58_001

3D structure

PDB id

1Z58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a complex of the ribosome large subunit with rapamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

GUGAGCUAA*UUAGGA*UAACCGAAC

Length

24 nucleotides

Bulged bases

1Z58|1|2|G|699, 1Z58|1|2|A|802, 1Z58|1|2|C|803, 1Z58|1|2|G|805

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1Z58|1|2|G|695
1Z58|1|2|U|696
1Z58|1|2|G|697
1Z58|1|2|A|698
1Z58|1|2|G|699
1Z58|1|2|C|700
1Z58|1|2|U|701
1Z58|1|2|A|702
1Z58|1|2|A|703
*
1Z58|1|2|U|785
1Z58|1|2|U|786
1Z58|1|2|A|787
1Z58|1|2|G|788
1Z58|1|2|G|789
1Z58|1|2|A|790
*
1Z58|1|2|U|800
1Z58|1|2|A|801
1Z58|1|2|A|802
1Z58|1|2|C|803
1Z58|1|2|C|804
1Z58|1|2|G|805
1Z58|1|2|A|806
1Z58|1|2|A|807
1Z58|1|2|C|808

Current chains

Chain 2

23S RIBOSOMAL RNA

Nearby chains