J3_1Z58_012

3D structure

PDB id

1Z58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a complex of the ribosome large subunit with rapamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

CCCCUCAAGCCGAAG*CACCUCAGAA*UGUAGGCGAACGAGCGG

Length

42 nucleotides

Bulged bases

1Z58|1|2|C|332, 1Z58|1|2|C|358, 1Z58|1|2|C|362

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1Z58|1|2|C|298
1Z58|1|2|C|299
1Z58|1|2|C|300
1Z58|1|2|C|301
1Z58|1|2|U|302
1Z58|1|2|C|303
1Z58|1|2|A|304
1Z58|1|2|A|305
1Z58|1|2|G|306
1Z58|1|2|C|307
1Z58|1|2|C|308
1Z58|1|2|G|309
1Z58|1|2|A|310
1Z58|1|2|A|311
1Z58|1|2|G|312
*
1Z58|1|2|C|327
1Z58|1|2|A|328
1Z58|1|2|C|329
1Z58|1|2|C|330
1Z58|1|2|U|331
1Z58|1|2|C|332
1Z58|1|2|A|333
1Z58|1|2|G|334
1Z58|1|2|A|335
1Z58|1|2|A|336
*
1Z58|1|2|U|348
1Z58|1|2|G|349
1Z58|1|2|U|350
1Z58|1|2|A|351
1Z58|1|2|G|352
1Z58|1|2|G|353
1Z58|1|2|C|354
1Z58|1|2|G|355
1Z58|1|2|A|356
1Z58|1|2|A|357
1Z58|1|2|C|358
1Z58|1|2|G|359
1Z58|1|2|A|360
1Z58|1|2|G|361
1Z58|1|2|C|362
1Z58|1|2|G|363
1Z58|1|2|G|364

Current chains

Chain 2

23S RIBOSOMAL RNA

Nearby chains