J3_1Z58_017

3D structure

PDB id

1Z58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a complex of the ribosome large subunit with rapamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

AUGC*GUUGGUAC*GUAUCGGGAGCUUCCUCGGAAGCGAAGU

Length

40 nucleotides

Bulged bases

1Z58|1|2|U|1459

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1Z58|1|2|A|1458
1Z58|1|2|U|1459
1Z58|1|2|G|1460
1Z58|1|2|C|1461
*
1Z58|1|2|G|1480
1Z58|1|2|U|1481
1Z58|1|2|U|1482
1Z58|1|2|G|1483
1Z58|1|2|G|1484
1Z58|1|2|U|1485
1Z58|1|2|A|1486
1Z58|1|2|C|1487
*
1Z58|1|2|G|1536
1Z58|1|2|U|1537
1Z58|1|2|A|1538
1Z58|1|2|U|1539
1Z58|1|2|C|1540
1Z58|1|2|G|1541
1Z58|1|2|G|1542
1Z58|1|2|G|1543
1Z58|1|2|A|1544
1Z58|1|2|G|1545
1Z58|1|2|C|1546
1Z58|1|2|U|1547
1Z58|1|2|U|1548
1Z58|1|2|C|1549
1Z58|1|2|C|1550
1Z58|1|2|U|1551
1Z58|1|2|C|1552
1Z58|1|2|G|1553
1Z58|1|2|G|1554
1Z58|1|2|A|1555
1Z58|1|2|A|1556
1Z58|1|2|G|1557
1Z58|1|2|C|1558
1Z58|1|2|G|1559
1Z58|1|2|A|1560
1Z58|1|2|A|1561
1Z58|1|2|G|1562
1Z58|1|2|U|1563

Current chains

Chain 2

23S RIBOSOMAL RNA

Nearby chains