J3_1Z58_020

3D structure

PDB id

1Z58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a complex of the ribosome large subunit with rapamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

AC*GAAAAGCCCCGA*UCGGGGAUGU

Length

24 nucleotides

Bulged bases

1Z58|1|2|A|70, 1Z58|1|2|A|71, 1Z58|1|2|A|72, 1Z58|1|2|A|73

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1Z58|1|2|A|55
1Z58|1|2|C|56
*
1Z58|1|2|G|69
1Z58|1|2|A|70
1Z58|1|2|A|71
1Z58|1|2|A|72
1Z58|1|2|A|73
1Z58|1|2|G|74
1Z58|1|2|C|75
1Z58|1|2|C|76
1Z58|1|2|C|77
1Z58|1|2|C|78
1Z58|1|2|G|79
1Z58|1|2|A|80
*
1Z58|1|2|U|103
1Z58|1|2|C|104
1Z58|1|2|G|105
1Z58|1|2|G|106
1Z58|1|2|G|107
1Z58|1|2|G|108
1Z58|1|2|A|109
1Z58|1|2|U|110
1Z58|1|2|G|111
1Z58|1|2|U|112

Current chains

Chain 2

23S RIBOSOMAL RNA

Nearby chains