J3_1Z58_025

3D structure

PDB id

1Z58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a complex of the ribosome large subunit with rapamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

CUCAA*UGUAGAG*UAGAAG

Length

18 nucleotides

Bulged bases

1Z58|1|2|U|2275, 1Z58|1|2|U|2298, 1Z58|1|2|A|2299, 1Z58|1|2|G|2313, 1Z58|1|2|A|2315

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1Z58|1|2|C|2274
1Z58|1|2|U|2275
1Z58|1|2|C|2276
1Z58|1|2|A|2277
1Z58|1|2|A|2278
*
1Z58|1|2|U|2296
1Z58|1|2|G|2297
1Z58|1|2|U|2298
1Z58|1|2|A|2299
1Z58|1|2|G|2300
1Z58|1|2|A|2301
1Z58|1|2|G|2302
*
1Z58|1|2|U|2311
1Z58|1|2|A|2312
1Z58|1|2|G|2313
1Z58|1|2|A|2314
1Z58|1|2|A|2315
1Z58|1|2|G|2316

Current chains

Chain 2

23S RIBOSOMAL RNA

Nearby chains