J3_1Z58_027

3D structure

PDB id

1Z58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a complex of the ribosome large subunit with rapamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

UC*GUUAAGAGG*UGCUCAUCA

Length

20 nucleotides

Bulged bases

1Z58|1|2|U|2807, 1Z58|1|2|U|2808, 1Z58|1|2|G|2854

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1Z58|1|2|U|2789
1Z58|1|2|C|2790
*
1Z58|1|2|G|2806
1Z58|1|2|U|2807
1Z58|1|2|U|2808
1Z58|1|2|A|2809
1Z58|1|2|A|2810
1Z58|1|2|G|2811
1Z58|1|2|A|2812
1Z58|1|2|G|2813
1Z58|1|2|G|2814
*
1Z58|1|2|U|2853
1Z58|1|2|G|2854
1Z58|1|2|C|2855
1Z58|1|2|U|2856
1Z58|1|2|C|2857
1Z58|1|2|A|2858
1Z58|1|2|U|2859
1Z58|1|2|C|2860
1Z58|1|2|A|2861

Current chains

Chain 2

23S RIBOSOMAL RNA

Nearby chains