J3_22TU_033

3D structure

PDB id

22TU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome in complex with DHX29

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AUUC*GGACCAGAG*CAUUU

Length

18 nucleotides

Bulged bases

22TU|1|S2|G|991

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

22TU|1|S2|A|938
22TU|1|S2|U|939
22TU|1|S2|U|940
22TU|1|S2|C|941
*
22TU|1|S2|G|985
22TU|1|S2|G|986
22TU|1|S2|A|987
22TU|1|S2|C|988
22TU|1|S2|C|989
22TU|1|S2|A|990
22TU|1|S2|G|991
22TU|1|S2|A|992
22TU|1|S2|G|993
*
22TU|1|S2|C|1000
22TU|1|S2|A|1001
22TU|1|S2|U|1002
22TU|1|S2|U|1003
22TU|1|S2|U|1004

Current chains

Chain S2

18S rRNA

Nearby chains

Chain Lp

60S ribosomal protein L37a

Chain SB

40S ribosomal protein S3a

Chain SN

40S ribosomal protein S13

Chain SO

40S ribosomal protein S14

Chain Sa

40S ribosomal protein S26