J3_23WI_014
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- AC*GAUAAGC*GAUUU
- Length
- 14 nucleotides
- Bulged bases
- 23WI|1|A|U|72, 23WI|1|A|A|74
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_23WI_014 not in the Motif Atlas
- Homologous match to J3_7A0S_002
- Geometric discrepancy: 0.157
- The information below is about J3_7A0S_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_01004.3
- Basepair signature
- cWW-cWW-F-F-F-cWW-F-cWW
- Number of instances in this motif group
- 11
Unit IDs
23WI|1|A|A|56
23WI|1|A|C|57
*
23WI|1|A|G|70
23WI|1|A|A|71
23WI|1|A|U|72
23WI|1|A|A|73
23WI|1|A|A|74
23WI|1|A|G|75
23WI|1|A|C|76
*
23WI|1|A|G|110
23WI|1|A|A|111
23WI|1|A|U|112
23WI|1|A|U|113
23WI|1|A|U|114
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 2
- 50S ribosomal protein L34
- Chain T
- 50S ribosomal protein L23
- Chain Y
- Large ribosomal subunit protein uL29
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