J3_23WI_026
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- UGGA*UAC*GGAA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_23WI_026 not in the Motif Atlas
- Homologous match to J3_6CZR_019
- Geometric discrepancy: 0.1523
- The information below is about J3_6CZR_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
23WI|1|a|U|943
23WI|1|a|G|944
23WI|1|a|G|945
23WI|1|a|A|946
*
23WI|1|a|U|1235
23WI|1|a|A|1236
23WI|1|a|C|1237
*
23WI|1|a|G|1337
23WI|1|a|G|1338
23WI|1|a|A|1339
23WI|1|a|A|1340
Current chains
- Chain a
- RNA (1539-MER)
Nearby chains
- Chain g
- Small ribosomal subunit protein uS7
- Chain i
- Small ribosomal subunit protein uS9
- Chain m
- Small ribosomal subunit protein uS13
Coloring options: