J3_28LN_026

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UU*AGAAG*CGUGGA

Length

13 nucleotides

Bulged bases

28LN|1|B5|A|1804, 28LN|1|B5|U|1833

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|B5|U|1725
28LN|1|B5|U|1726
*
28LN|1|B5|A|1801
28LN|1|B5|G|1802
28LN|1|B5|A|1803
28LN|1|B5|A|1804
28LN|1|B5|G|1805
*
28LN|1|B5|C|1831
28LN|1|B5|G|1832
28LN|1|B5|U|1833
28LN|1|B5|G|1834
28LN|1|B5|G|1835
28LN|1|B5|A|1836

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BF

Large ribosomal subunit protein uL30

Chain BT

60S ribosomal protein L21

Chain Bb

Large ribosomal subunit protein eL29