J3_28LN_036
3D structure
- PDB id
- 28LN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- XBP1u-stalled RPL4 RNC in complex with NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GGGG*CGCUUCUGGCGCCAAG*CGAC
- Length
- 24 nucleotides
- Bulged bases
- 28LN|1|B5|C|4115, 28LN|1|B5|U|4116, 28LN|1|B5|U|4117, 28LN|1|B5|U|4119, 28LN|1|B5|G|4120
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
28LN|1|B5|G|4090
28LN|1|B5|G|4091
28LN|1|B5|G|4092
28LN|1|B5|G|4093
*
28LN|1|B5|C|4113
28LN|1|B5|G|4114
28LN|1|B5|C|4115
28LN|1|B5|U|4116
28LN|1|B5|U|4117
28LN|1|B5|C|4118
28LN|1|B5|U|4119
28LN|1|B5|G|4120
28LN|1|B5|G|4121
28LN|1|B5|C|4122
28LN|1|B5|G|4123
28LN|1|B5|C|4124
28LN|1|B5|C|4125
28LN|1|B5|A|4126
28LN|1|B5|A|4127
28LN|1|B5|G|4128
*
28LN|1|B5|C|4154
28LN|1|B5|G|4155
28LN|1|B5|A|4156
28LN|1|B5|C|4157
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BA
- Large ribosomal subunit protein uL2
- Chain BG
- 60S ribosomal protein L7a
- Chain BZ
- 60S ribosomal protein L27
- Chain Bc
- 60S ribosomal protein L30
- Chain Bg
- 60S ribosomal protein L34
- Chain Bp
- 60S ribosomal protein L37a
Coloring options: