J3_2AAR_001

3D structure

PDB id

2AAR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of trigger factor binding domain in biologically homologous complex with eubacterial ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GUGAGCUA*UAGGA*UAACCGAAC

Length

22 nucleotides

Bulged bases

2AAR|1|0|A|802, 2AAR|1|0|C|803, 2AAR|1|0|G|805

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2AAR|1|0|G|695
2AAR|1|0|U|696
2AAR|1|0|G|697
2AAR|1|0|A|698
2AAR|1|0|G|699
2AAR|1|0|C|700
2AAR|1|0|U|701
2AAR|1|0|A|702
*
2AAR|1|0|U|786
2AAR|1|0|A|787
2AAR|1|0|G|788
2AAR|1|0|G|789
2AAR|1|0|A|790
*
2AAR|1|0|U|800
2AAR|1|0|A|801
2AAR|1|0|A|802
2AAR|1|0|C|803
2AAR|1|0|C|804
2AAR|1|0|G|805
2AAR|1|0|A|806
2AAR|1|0|A|807
2AAR|1|0|C|808

Current chains

Chain 0

23S ribosomal RNA

Nearby chains