3D structure

PDB id
2AW7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution. This file contains the 30S subunit of the second 70S ribosome. The entire crystal structure contains two 70S ribosomes and is described in remark 400.
Experimental method
X-RAY DIFFRACTION
Resolution
3.46 Å

Loop

Sequence
UGGA*UAC*GGAA
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_2AW7_003 not in the Motif Atlas
Geometric match to J3_5J7L_005
Geometric discrepancy: 0.1311
The information below is about J3_5J7L_005
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_52655.4
Basepair signature
cWW-tSH-cWW-F-cWW-cWW
Number of instances in this motif group
4

Unit IDs

2AW7|1|A|U|943
2AW7|1|A|G|944
2AW7|1|A|G|945
2AW7|1|A|A|946
*
2AW7|1|A|U|1235
2AW7|1|A|A|1236
2AW7|1|A|C|1237
*
2AW7|1|A|G|1337
2AW7|1|A|G|1338
2AW7|1|A|A|1339
2AW7|1|A|A|1340

Current chains

Chain A
16S ribosomal RNA

Nearby chains

Chain G
30S ribosomal protein S7
Chain I
30S ribosomal protein S9
Chain M
30S ribosomal protein S13

Coloring options:


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