J3_2H0X_002

3D structure

PDB id

2H0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozyme

Experimental method

X-RAY DIFFRACTION

Resolution

2.3 Å

Loop

Sequence

GG*UGAC*GAGACAUC

Length

14 nucleotides

Bulged bases

2H0X|1|B|G|55

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_2H0X_002 not in the Motif Atlas

Geometric match to J3_2Z75_001

Geometric discrepancy: 0.0349

The information below is about J3_2Z75_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_75923.1

Basepair signature

cWW-tHS-cWW-tWW-F-F-cSH-F-cWW

Number of instances in this motif group

2

Unit IDs

2H0X|1|A|G|7
2H0X|1|A|G|8
*
2H0X|1|B|U|33
2H0X|1|B|G|34
2H0X|1|B|A|35
2H0X|1|B|C|36
*
2H0X|1|B|G|53
2H0X|1|B|A|54
2H0X|1|B|G|55
2H0X|1|B|A|56
2H0X|1|B|C|57
2H0X|1|B|A|58
2H0X|1|B|U|59
2H0X|1|B|C|60

Current chains

Chain A

glmS ribozyme amino RNA inhibitor

Chain B

glmS ribozyme RNA

Nearby chains