J3_2YKR_008
3D structure
- PDB id
- 2YKR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 30S ribosomal subunit with RsgA bound in the presence of GMPPNP
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.8 Å
Loop
- Sequence
- GUCGUCAG*CGCAACC*GAUGACGUC
- Length
- 24 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
2YKR|1|A|G|1061
2YKR|1|A|U|1062
2YKR|1|A|C|1063
2YKR|1|A|G|1064
2YKR|1|A|U|1065
2YKR|1|A|C|1066
2YKR|1|A|A|1067
2YKR|1|A|G|1068
*
2YKR|1|A|C|1107
2YKR|1|A|G|1108
2YKR|1|A|C|1109
2YKR|1|A|A|1110
2YKR|1|A|A|1111
2YKR|1|A|C|1112
2YKR|1|A|C|1113
*
2YKR|1|A|G|1187
2YKR|1|A|A|1188
2YKR|1|A|U|1189
2YKR|1|A|G|1190
2YKR|1|A|A|1191
2YKR|1|A|C|1192
2YKR|1|A|G|1193
2YKR|1|A|U|1194
2YKR|1|A|C|1195
Current chains
- Chain A
- 16S RRNA
Nearby chains
- Chain B
- 30S RIBOSOMAL PROTEIN S2
- Chain C
- 30S RIBOSOMAL PROTEIN S3
- Chain E
- 30S RIBOSOMAL PROTEIN S5
- Chain G
- 30S RIBOSOMAL PROTEIN S7
- Chain I
- 30S RIBOSOMAL PROTEIN S9
- Chain J
- 30S RIBOSOMAL PROTEIN S10
- Chain N
- 30S RIBOSOMAL PROTEIN S14
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