J3_2YKR_026
3D structure
- PDB id
- 2YKR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 30S ribosomal subunit with RsgA bound in the presence of GMPPNP
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.8 Å
Loop
- Sequence
- UAU*AGACUGCC*GGAGGAAGGUG
- Length
- 22 nucleotides
- Bulged bases
- 2YKR|1|A|U|1183
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
2YKR|1|A|U|1116
2YKR|1|A|A|1117
2YKR|1|A|U|1118
*
2YKR|1|A|A|1155
2YKR|1|A|G|1156
2YKR|1|A|A|1157
2YKR|1|A|C|1158
2YKR|1|A|U|1159
2YKR|1|A|G|1160
2YKR|1|A|C|1161
2YKR|1|A|C|1162
*
2YKR|1|A|G|1174
2YKR|1|A|G|1175
2YKR|1|A|A|1176
2YKR|1|A|G|1177
2YKR|1|A|G|1178
2YKR|1|A|A|1179
2YKR|1|A|A|1180
2YKR|1|A|G|1181
2YKR|1|A|G|1182
2YKR|1|A|U|1183
2YKR|1|A|G|1184
Current chains
- Chain A
- 16S RRNA
Nearby chains
- Chain B
- 30S RIBOSOMAL PROTEIN S2
- Chain G
- 30S RIBOSOMAL PROTEIN S7
- Chain I
- 30S RIBOSOMAL PROTEIN S9
- Chain N
- 30S RIBOSOMAL PROTEIN S14
Coloring options: