J3_30RB_015

3D structure

PDB id

30RB (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with peptidyl-tRNA and Hsp15

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

CAAUG*CGUAGUCC*GUCG

Length

17 nucleotides

Bulged bases

30RB|1|A|U|1240, 30RB|1|A|C|1302

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

30RB|1|A|C|1237
30RB|1|A|A|1238
30RB|1|A|A|1239
30RB|1|A|U|1240
30RB|1|A|G|1241
*
30RB|1|A|C|1296
30RB|1|A|G|1297
30RB|1|A|U|1298
30RB|1|A|A|1299
30RB|1|A|G|1300
30RB|1|A|U|1301
30RB|1|A|C|1302
30RB|1|A|C|1303
*
30RB|1|A|G|1334
30RB|1|A|U|1335
30RB|1|A|C|1336
30RB|1|A|G|1337

Current chains

Chain A

16S rRNA

Nearby chains

Chain G

Small ribosomal subunit protein uS7

Chain M

Small ribosomal subunit protein uS13