J3_38JC_001

3D structure

PDB id

38JC (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNA polymerase ribozyme 85h34 replication complex, consensus structure.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.84 Å

Loop

Sequence

GUACCC*GACAGAAAGG*CAC

Length

19 nucleotides

Bulged bases

38JC|1|A|U|107, 38JC|1|A|A|134

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

38JC|1|A|G|106
38JC|1|A|U|107
38JC|1|A|A|108
38JC|1|A|C|109
38JC|1|A|C|110
38JC|1|A|C|111
*
38JC|1|A|G|128
38JC|1|A|A|129
38JC|1|A|C|130
38JC|1|A|A|131
38JC|1|A|G|132
38JC|1|A|A|133
38JC|1|A|A|134
38JC|1|A|A|135
38JC|1|A|G|136
38JC|1|A|G|137
*
38JC|1|A|C|152
38JC|1|A|A|153
38JC|1|A|C|154

Current chains

Chain A

RNA polymerase ribozyme 85h34

Nearby chains

Chain C

RNA template

Chain B

RNA primer