38JC Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_38JC_002 | 1/A/30:34 | No text annotation | ||
| HL_38JC_003 | 1/A/48:53 | No text annotation | geometric HL_9E6Q_021 HL_34789.7 | |
| HL_38JC_004 | 1/A/62:69 | Pseudoknot geometry | geometric HL_3HHN_009 HL_30680.5 | |
| HL_38JC_005 | 1/A/78:90 | No text annotation | ||
| HL_38JC_006 | 1/A/141:149 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_38JC_001 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_38JC_002 | 1/A/36:38, 1/A/102:103 | Single bulged C | geometric IL_8F5G_002 IL_05642.6 | |
| IL_38JC_003 | 1/A/111:115, 1/A/123:128 | No text annotation | geometric IL_6FZ0_002 IL_12409.1 | |
| IL_38JC_004 | 1/A/139:141, 1/A/149:150 | Single bulged U | geometric IL_9H3G_059 IL_97561.8 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_38JC_001 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_38JC_001 | 1/A/106:111, 1/A/128:137, 1/A/152:154 | No text annotation | ||
| J4_38JC_001 | 1/A/44:45, 1/A/56:59, 1/A/72:73, 1/A/95:96 | No text annotation |
Problematic loops
No problematic loops
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