J3_3CCR_003
3D structure
- PDB id
- 3CCR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488C. Density for anisomycin is visible but not included in the model.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CAA*UGUUAG*CGUG
- Length
- 13 nucleotides
- Bulged bases
- 3CCR|1|0|U|825
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_3CCR_003 not in the Motif Atlas
- Homologous match to J3_4V9F_003
- Geometric discrepancy: 0.0613
- The information below is about J3_4V9F_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_69816.1
- Basepair signature
- cWW-tHS-F-cWW-tHS-cWW-F
- Number of instances in this motif group
- 9
Unit IDs
3CCR|1|0|C|789
3CCR|1|0|A|790
3CCR|1|0|A|791
*
3CCR|1|0|U|823
3CCR|1|0|G|824
3CCR|1|0|U|825
3CCR|1|0|U|826
3CCR|1|0|A|827
3CCR|1|0|G|828
*
3CCR|1|0|C|853
3CCR|1|0|G|854
3CCR|1|0|U|855
3CCR|1|0|G|856
Current chains
- Chain 0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L37e
- Chain A
- 50S ribosomal protein L2P
- Chain P
- 50S ribosomal protein L19e
- Chain Z
- 50S ribosomal protein L37Ae
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