3D structure

PDB id
3CCS (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2482A
Experimental method
X-RAY DIFFRACTION
Resolution
2.95 Å

Loop

Sequence
UAAG*CGAGAAC*GUG
Length
14 nucleotides
Bulged bases
3CCS|1|0|G|1683, 3CCS|1|0|A|1684
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_3CCS_006 not in the Motif Atlas
Homologous match to J3_4V9F_006
Geometric discrepancy: 0.0423
The information below is about J3_4V9F_006
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_19545.2
Basepair signature
cWW-F-F-tHS-cWW-cWW-F-F
Number of instances in this motif group
6

Unit IDs

3CCS|1|0|U|1412
3CCS|1|0|A|1413
3CCS|1|0|A|1414
3CCS|1|0|G|1415
*
3CCS|1|0|C|1680
3CCS|1|0|G|1681
3CCS|1|0|A|1682
3CCS|1|0|G|1683
3CCS|1|0|A|1684
3CCS|1|0|A|1685
3CCS|1|0|C|1686
*
3CCS|1|0|G|1695
3CCS|1|0|U|1696
3CCS|1|0|G|1697

Current chains

Chain 0
23S RIBOSOMAL RNA

Nearby chains

Chain 1
50S ribosomal protein L37e
Chain 2
50S ribosomal protein L39e
Chain P
50S ribosomal protein L19e

Coloring options:


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