J3_3CCU_007

3D structure

PDB id

3CCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2482C

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GCUG*CUCAC*GGACACC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_3CCU_007 not in the Motif Atlas

Homologous match to J3_4V9F_007

Geometric discrepancy: 0.0396

The information below is about J3_4V9F_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_97609.1

Basepair signature

cWW-tSH-tHW-F-cWW-tHH-F-cWW-F

Number of instances in this motif group

1

Unit IDs

3CCU|1|0|G|2131
3CCU|1|0|C|2132
3CCU|1|0|U|2133
3CCU|1|0|G|2134
*
3CCU|1|0|C|2241
3CCU|1|0|U|2242
3CCU|1|0|C|2243
3CCU|1|0|A|2244
3CCU|1|0|C|2245
*
3CCU|1|0|G|2256
3CCU|1|0|G|2257
3CCU|1|0|A|2258
3CCU|1|0|C|2259
3CCU|1|0|A|2260
3CCU|1|0|C|2261
3CCU|1|0|C|2262

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain A

50S ribosomal protein L2P

Chain M

50S ribosomal protein L15e