J3_3CCV_007

3D structure

PDB id

3CCV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2616A

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GCUG*CUCAC*GGACACC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_3CCV_007 not in the Motif Atlas

Homologous match to J3_4V9F_007

Geometric discrepancy: 0.0471

The information below is about J3_4V9F_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_86017.1

Basepair signature

cWW-F-F-F-F-cWW-F-tWH-tHS-cWW

Number of instances in this motif group

2

Unit IDs

3CCV|1|0|G|2131
3CCV|1|0|C|2132
3CCV|1|0|U|2133
3CCV|1|0|G|2134
*
3CCV|1|0|C|2241
3CCV|1|0|U|2242
3CCV|1|0|C|2243
3CCV|1|0|A|2244
3CCV|1|0|C|2245
*
3CCV|1|0|G|2256
3CCV|1|0|G|2257
3CCV|1|0|A|2258
3CCV|1|0|C|2259
3CCV|1|0|A|2260
3CCV|1|0|C|2261
3CCV|1|0|C|2262

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain A

50S ribosomal protein L2P

Chain M

50S ribosomal protein L15e