J3_3CCV_011

3D structure

PDB id

3CCV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2616A

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UG*CUGCAAAG*CA

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_3CCV_011 not in the Motif Atlas

Geometric match to J3_4V9F_011

Geometric discrepancy: 0.0431

The information below is about J3_4V9F_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_68715.1

Basepair signature

cWW-tWH-cWW-tSH-F-cWW-F

Number of instances in this motif group

10

Unit IDs

3CCV|1|0|U|27
3CCV|1|0|G|28
*
3CCV|1|0|C|480
3CCV|1|0|U|481
3CCV|1|0|G|482
3CCV|1|0|C|483
3CCV|1|0|A|484
3CCV|1|0|A|485
3CCV|1|0|A|486
3CCV|1|0|G|487
*
3CCV|1|0|C|515
3CCV|1|0|A|516

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain 2

50S ribosomal protein L39e

Chain C

50S ribosomal protein L4P

Chain R

50S ribosomal protein L22P

Chain T

50S ribosomal protein L24P